Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rpp40Q8R1F9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp40Q8R1F9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp40Q8R1F9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rpp40Q8R1F9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
Rpp40Q8R1F9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Rpp40Q8R1F9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.45■■□□□ 1.35
Rpp40Q8R1F9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Gm45444-201ENSMUST00000211394 898 ntBASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.45■■□□□ 1.34
Rpp40Q8R1F9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpp40Q8R1F9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rpp40Q8R1F9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rpp40Q8R1F9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rpp40Q8R1F9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rpp40Q8R1F9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rpp40Q8R1F9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rpp40Q8R1F9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Gm22567-201ENSMUST00000175542 342 ntBASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rpp40Q8R1F9 Gm43566-201ENSMUST00000196851 808 ntBASIC23.4■■□□□ 1.34
Rpp40Q8R1F9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rpp40Q8R1F9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rpp40Q8R1F9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rpp40Q8R1F9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.39■■□□□ 1.33
Rpp40Q8R1F9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rpp40Q8R1F9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rpp40Q8R1F9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.38■■□□□ 1.33
Rpp40Q8R1F9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.38■■□□□ 1.33
Rpp40Q8R1F9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Rpp40Q8R1F9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rpp40Q8R1F9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpp40Q8R1F9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpp40Q8R1F9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Rpp40Q8R1F9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpp40Q8R1F9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Rpp40Q8R1F9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpp40Q8R1F9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rpp40Q8R1F9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rpp40Q8R1F9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rpp40Q8R1F9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Rpp40Q8R1F9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rpp40Q8R1F9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.33■■□□□ 1.33
Rpp40Q8R1F9 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.33■■□□□ 1.33
Rpp40Q8R1F9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.33■■□□□ 1.33
Rpp40Q8R1F9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpp40Q8R1F9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpp40Q8R1F9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rpp40Q8R1F9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Rpp40Q8R1F9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Rpp40Q8R1F9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Rpp40Q8R1F9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rpp40Q8R1F9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rpp40Q8R1F9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rpp40Q8R1F9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 373.8 ms