Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim31Q8R0K2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim31Q8R0K2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.14■□□□□ 0.97
Trim31Q8R0K2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim31Q8R0K2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim31Q8R0K2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim31Q8R0K2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.13■□□□□ 0.97
Trim31Q8R0K2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim31Q8R0K2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim31Q8R0K2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim31Q8R0K2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trim31Q8R0K2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim31Q8R0K2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim31Q8R0K2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim31Q8R0K2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim31Q8R0K2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim31Q8R0K2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim31Q8R0K2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim31Q8R0K2 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.08■□□□□ 0.97
Trim31Q8R0K2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim31Q8R0K2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim31Q8R0K2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim31Q8R0K2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Gm10420-201ENSMUST00000121713 882 ntBASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim31Q8R0K2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim31Q8R0K2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim31Q8R0K2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.04■□□□□ 0.96
Trim31Q8R0K2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim31Q8R0K2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim31Q8R0K2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim31Q8R0K2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim31Q8R0K2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.02■□□□□ 0.96
Trim31Q8R0K2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim31Q8R0K2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim31Q8R0K2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.95
Trim31Q8R0K2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.01■□□□□ 0.95
Trim31Q8R0K2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim31Q8R0K2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim31Q8R0K2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim31Q8R0K2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim31Q8R0K2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim31Q8R0K2 Gm13042-201ENSMUST00000119244 1955 ntBASIC21■□□□□ 0.95
Trim31Q8R0K2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim31Q8R0K2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim31Q8R0K2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms