Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28aQ8K3Y3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lin28aQ8K3Y3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lin28aQ8K3Y3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lin28aQ8K3Y3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Lin28aQ8K3Y3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.33■□□□□ 0.85
Lin28aQ8K3Y3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lin28aQ8K3Y3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lin28aQ8K3Y3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lin28aQ8K3Y3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.33■□□□□ 0.84
Lin28aQ8K3Y3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lin28aQ8K3Y3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Gm45444-201ENSMUST00000211394 898 ntBASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin28aQ8K3Y3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin28aQ8K3Y3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Lin28aQ8K3Y3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin28aQ8K3Y3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28aQ8K3Y3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28aQ8K3Y3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin28aQ8K3Y3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lin28aQ8K3Y3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lin28aQ8K3Y3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lin28aQ8K3Y3 Gm43566-201ENSMUST00000196851 808 ntBASIC20.27■□□□□ 0.84
Lin28aQ8K3Y3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lin28aQ8K3Y3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin28aQ8K3Y3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lin28aQ8K3Y3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin28aQ8K3Y3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lin28aQ8K3Y3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin28aQ8K3Y3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lin28aQ8K3Y3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Lin28aQ8K3Y3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28aQ8K3Y3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28aQ8K3Y3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.24■□□□□ 0.83
Lin28aQ8K3Y3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin28aQ8K3Y3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lin28aQ8K3Y3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Lin28aQ8K3Y3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin28aQ8K3Y3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin28aQ8K3Y3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin28aQ8K3Y3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lin28aQ8K3Y3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lin28aQ8K3Y3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin28aQ8K3Y3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms