Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Scamp1Q8K021 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scamp1Q8K021 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scamp1Q8K021 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scamp1Q8K021 Gm22567-201ENSMUST00000175542 342 ntBASIC21.29■■□□□ 1
Scamp1Q8K021 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scamp1Q8K021 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scamp1Q8K021 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scamp1Q8K021 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scamp1Q8K021 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scamp1Q8K021 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scamp1Q8K021 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scamp1Q8K021 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scamp1Q8K021 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scamp1Q8K021 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Scamp1Q8K021 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scamp1Q8K021 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scamp1Q8K021 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scamp1Q8K021 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scamp1Q8K021 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scamp1Q8K021 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.25■□□□□ 0.99
Scamp1Q8K021 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scamp1Q8K021 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scamp1Q8K021 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.23■□□□□ 0.99
Scamp1Q8K021 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.23■□□□□ 0.99
Scamp1Q8K021 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scamp1Q8K021 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scamp1Q8K021 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scamp1Q8K021 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scamp1Q8K021 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Scamp1Q8K021 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Scamp1Q8K021 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.21■□□□□ 0.99
Scamp1Q8K021 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.21■□□□□ 0.99
Scamp1Q8K021 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scamp1Q8K021 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scamp1Q8K021 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scamp1Q8K021 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scamp1Q8K021 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scamp1Q8K021 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Gm14117-201ENSMUST00000122417 843 ntBASIC21.17■□□□□ 0.98
Scamp1Q8K021 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Rps24-207ENSMUST00000224568 714 ntBASIC21.17■□□□□ 0.98
Scamp1Q8K021 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scamp1Q8K021 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Scamp1Q8K021 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scamp1Q8K021 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scamp1Q8K021 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scamp1Q8K021 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms