Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShfQ8CG80 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShfQ8CG80 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShfQ8CG80 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShfQ8CG80 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShfQ8CG80 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShfQ8CG80 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShfQ8CG80 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShfQ8CG80 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ShfQ8CG80 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.44■□□□□ 0.7
ShfQ8CG80 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShfQ8CG80 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShfQ8CG80 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShfQ8CG80 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ShfQ8CG80 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.43■□□□□ 0.7
ShfQ8CG80 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShfQ8CG80 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ShfQ8CG80 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
ShfQ8CG80 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShfQ8CG80 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ShfQ8CG80 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.42■□□□□ 0.7
ShfQ8CG80 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ShfQ8CG80 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShfQ8CG80 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShfQ8CG80 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShfQ8CG80 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShfQ8CG80 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.41■□□□□ 0.7
ShfQ8CG80 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.41■□□□□ 0.7
ShfQ8CG80 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShfQ8CG80 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShfQ8CG80 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ShfQ8CG80 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ShfQ8CG80 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ShfQ8CG80 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShfQ8CG80 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ShfQ8CG80 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShfQ8CG80 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShfQ8CG80 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.39■□□□□ 0.7
ShfQ8CG80 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ShfQ8CG80 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShfQ8CG80 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShfQ8CG80 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShfQ8CG80 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShfQ8CG80 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShfQ8CG80 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.39■□□□□ 0.69
ShfQ8CG80 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShfQ8CG80 Gm44428-201ENSMUST00000204474 874 ntBASIC19.38■□□□□ 0.69
ShfQ8CG80 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShfQ8CG80 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShfQ8CG80 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ShfQ8CG80 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShfQ8CG80 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ShfQ8CG80 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShfQ8CG80 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShfQ8CG80 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.37■□□□□ 0.69
ShfQ8CG80 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.37■□□□□ 0.69
ShfQ8CG80 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShfQ8CG80 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShfQ8CG80 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
ShfQ8CG80 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.37■□□□□ 0.69
ShfQ8CG80 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
ShfQ8CG80 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.36■□□□□ 0.69
ShfQ8CG80 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShfQ8CG80 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShfQ8CG80 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.36■□□□□ 0.69
ShfQ8CG80 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShfQ8CG80 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShfQ8CG80 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShfQ8CG80 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.35■□□□□ 0.69
ShfQ8CG80 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.35■□□□□ 0.69
ShfQ8CG80 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShfQ8CG80 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShfQ8CG80 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShfQ8CG80 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.34■□□□□ 0.69
ShfQ8CG80 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ShfQ8CG80 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
ShfQ8CG80 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShfQ8CG80 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.33■□□□□ 0.69
ShfQ8CG80 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShfQ8CG80 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.33■□□□□ 0.68
ShfQ8CG80 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShfQ8CG80 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShfQ8CG80 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms