Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Smc4Q8CG47 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Smc4Q8CG47 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Smc4Q8CG47 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Smc4Q8CG47 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.95■■□□□ 1.9
Smc4Q8CG47 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Smc4Q8CG47 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smc4Q8CG47 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Smc4Q8CG47 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smc4Q8CG47 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.93■■□□□ 1.9
Smc4Q8CG47 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Smc4Q8CG47 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.92■■□□□ 1.9
Smc4Q8CG47 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.92■■□□□ 1.9
Smc4Q8CG47 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc4Q8CG47 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Smc4Q8CG47 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.91■■□□□ 1.9
Smc4Q8CG47 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.91■■□□□ 1.9
Smc4Q8CG47 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Smc4Q8CG47 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Smc4Q8CG47 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc4Q8CG47 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
Smc4Q8CG47 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Smc4Q8CG47 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Smc4Q8CG47 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Smc4Q8CG47 Gm10232-201ENSMUST00000089221 720 ntBASIC26.89■■□□□ 1.9
Smc4Q8CG47 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Smc4Q8CG47 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Smc4Q8CG47 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smc4Q8CG47 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Smc4Q8CG47 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smc4Q8CG47 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Smc4Q8CG47 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc4Q8CG47 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc4Q8CG47 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.86■■□□□ 1.89
Smc4Q8CG47 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc4Q8CG47 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smc4Q8CG47 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.85■■□□□ 1.89
Smc4Q8CG47 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc4Q8CG47 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Smc4Q8CG47 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc4Q8CG47 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc4Q8CG47 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.84■■□□□ 1.89
Smc4Q8CG47 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smc4Q8CG47 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.84■■□□□ 1.89
Smc4Q8CG47 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Smc4Q8CG47 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.83■■□□□ 1.89
Smc4Q8CG47 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
Smc4Q8CG47 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Gm22567-201ENSMUST00000175542 342 ntBASIC26.82■■□□□ 1.88
Smc4Q8CG47 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smc4Q8CG47 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.81■■□□□ 1.88
Smc4Q8CG47 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Smc4Q8CG47 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Smc4Q8CG47 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smc4Q8CG47 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
Smc4Q8CG47 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smc4Q8CG47 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Smc4Q8CG47 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Smc4Q8CG47 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.79■■□□□ 1.88
Smc4Q8CG47 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Smc4Q8CG47 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Smc4Q8CG47 Rps24-207ENSMUST00000224568 714 ntBASIC26.79■■□□□ 1.88
Smc4Q8CG47 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc4Q8CG47 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.78■■□□□ 1.88
Smc4Q8CG47 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc4Q8CG47 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc4Q8CG47 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Smc4Q8CG47 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Smc4Q8CG47 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Smc4Q8CG47 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.77■■□□□ 1.88
Smc4Q8CG47 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc4Q8CG47 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc4Q8CG47 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc4Q8CG47 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Smc4Q8CG47 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.75■■□□□ 1.87
Smc4Q8CG47 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Smc4Q8CG47 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Smc4Q8CG47 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.75■■□□□ 1.87
Smc4Q8CG47 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.75■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms