Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb7Q8CDY9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb7Q8CDY9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.71■■□□□ 1.07
Pcdhb7Q8CDY9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb7Q8CDY9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb7Q8CDY9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb7Q8CDY9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb7Q8CDY9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhb7Q8CDY9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb7Q8CDY9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb7Q8CDY9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb7Q8CDY9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb7Q8CDY9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb7Q8CDY9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Gm11175-201ENSMUST00000116172 543 ntBASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb7Q8CDY9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb7Q8CDY9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb7Q8CDY9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb7Q8CDY9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb7Q8CDY9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb7Q8CDY9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb7Q8CDY9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb7Q8CDY9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.6■■□□□ 1.05
Pcdhb7Q8CDY9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb7Q8CDY9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhb7Q8CDY9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb7Q8CDY9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb7Q8CDY9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb7Q8CDY9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.58■■□□□ 1.04
Pcdhb7Q8CDY9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb7Q8CDY9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Pcdhb7Q8CDY9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb7Q8CDY9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb7Q8CDY9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb7Q8CDY9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb7Q8CDY9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb7Q8CDY9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb7Q8CDY9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms