Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nhlrc1Q8BR37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nhlrc1Q8BR37 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nhlrc1Q8BR37 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nhlrc1Q8BR37 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nhlrc1Q8BR37 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nhlrc1Q8BR37 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.77■□□□□ 0.28
Nhlrc1Q8BR37 Gm10232-201ENSMUST00000089221 720 ntBASIC16.77■□□□□ 0.28
Nhlrc1Q8BR37 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nhlrc1Q8BR37 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nhlrc1Q8BR37 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nhlrc1Q8BR37 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nhlrc1Q8BR37 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nhlrc1Q8BR37 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nhlrc1Q8BR37 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nhlrc1Q8BR37 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nhlrc1Q8BR37 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhlrc1Q8BR37 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.73■□□□□ 0.27
Nhlrc1Q8BR37 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.73■□□□□ 0.27
Nhlrc1Q8BR37 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhlrc1Q8BR37 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nhlrc1Q8BR37 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nhlrc1Q8BR37 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nhlrc1Q8BR37 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nhlrc1Q8BR37 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhlrc1Q8BR37 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Gm14117-201ENSMUST00000122417 843 ntBASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Gm9959-201ENSMUST00000068277 390 ntBASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhlrc1Q8BR37 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nhlrc1Q8BR37 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nhlrc1Q8BR37 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms