Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smco3Q8BQM7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smco3Q8BQM7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smco3Q8BQM7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smco3Q8BQM7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smco3Q8BQM7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Smco3Q8BQM7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smco3Q8BQM7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.84■□□□□ 0.45
Smco3Q8BQM7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.84■□□□□ 0.45
Smco3Q8BQM7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smco3Q8BQM7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Smco3Q8BQM7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smco3Q8BQM7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smco3Q8BQM7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smco3Q8BQM7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smco3Q8BQM7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Smco3Q8BQM7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.82■□□□□ 0.44
Smco3Q8BQM7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.82■□□□□ 0.44
Smco3Q8BQM7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smco3Q8BQM7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smco3Q8BQM7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Smco3Q8BQM7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smco3Q8BQM7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smco3Q8BQM7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smco3Q8BQM7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smco3Q8BQM7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smco3Q8BQM7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.78■□□□□ 0.44
Smco3Q8BQM7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Notumos-201ENSMUST00000151998 2659 ntBASIC17.77■□□□□ 0.44
Smco3Q8BQM7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smco3Q8BQM7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smco3Q8BQM7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smco3Q8BQM7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smco3Q8BQM7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.74■□□□□ 0.43
Smco3Q8BQM7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smco3Q8BQM7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smco3Q8BQM7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smco3Q8BQM7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Smco3Q8BQM7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smco3Q8BQM7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smco3Q8BQM7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms