Protein–RNA interactions for Protein: Q8BIQ5

Cstf2, Cleavage stimulation factor subunit 2, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2Q8BIQ5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Cstf2Q8BIQ5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.33■■□□□ 1
Cstf2Q8BIQ5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cstf2Q8BIQ5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Cstf2Q8BIQ5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cstf2Q8BIQ5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cstf2Q8BIQ5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cstf2Q8BIQ5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.31■■□□□ 1
Cstf2Q8BIQ5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cstf2Q8BIQ5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Cstf2Q8BIQ5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.29■■□□□ 1
Cstf2Q8BIQ5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cstf2Q8BIQ5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cstf2Q8BIQ5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cstf2Q8BIQ5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cstf2Q8BIQ5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2Q8BIQ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2Q8BIQ5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cstf2Q8BIQ5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cstf2Q8BIQ5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cstf2Q8BIQ5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2Q8BIQ5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2Q8BIQ5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2Q8BIQ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2Q8BIQ5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2Q8BIQ5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2Q8BIQ5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.24■□□□□ 0.99
Cstf2Q8BIQ5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2Q8BIQ5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Cstf2Q8BIQ5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2Q8BIQ5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Cstf2Q8BIQ5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2Q8BIQ5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2Q8BIQ5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2Q8BIQ5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2Q8BIQ5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms