Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Scn3bQ8BHK2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn3bQ8BHK2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Scn3bQ8BHK2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn3bQ8BHK2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn3bQ8BHK2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn3bQ8BHK2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scn3bQ8BHK2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn3bQ8BHK2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn3bQ8BHK2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn3bQ8BHK2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn3bQ8BHK2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn3bQ8BHK2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn3bQ8BHK2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn3bQ8BHK2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scn3bQ8BHK2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn3bQ8BHK2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn3bQ8BHK2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Scn3bQ8BHK2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn3bQ8BHK2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn3bQ8BHK2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Scn3bQ8BHK2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scn3bQ8BHK2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn3bQ8BHK2 Gm22567-201ENSMUST00000175542 342 ntBASIC20.14■□□□□ 0.81
Scn3bQ8BHK2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scn3bQ8BHK2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Scn3bQ8BHK2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Scn3bQ8BHK2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scn3bQ8BHK2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scn3bQ8BHK2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scn3bQ8BHK2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scn3bQ8BHK2 Nkain2-201ENSMUST00000092602 558 ntBASIC20.12■□□□□ 0.81
Scn3bQ8BHK2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scn3bQ8BHK2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn3bQ8BHK2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn3bQ8BHK2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn3bQ8BHK2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn3bQ8BHK2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scn3bQ8BHK2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn3bQ8BHK2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.07■□□□□ 0.8
Scn3bQ8BHK2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn3bQ8BHK2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms