Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.4■■□□□ 1.18
Tnrc18Q80WC3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnrc18Q80WC3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tnrc18Q80WC3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tnrc18Q80WC3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Tnrc18Q80WC3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnrc18Q80WC3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Tnrc18Q80WC3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc18Q80WC3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Tnrc18Q80WC3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc18Q80WC3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Tnrc18Q80WC3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc18Q80WC3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.37■■□□□ 1.17
Tnrc18Q80WC3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnrc18Q80WC3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.36■■□□□ 1.17
Tnrc18Q80WC3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnrc18Q80WC3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tnrc18Q80WC3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tnrc18Q80WC3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
Tnrc18Q80WC3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnrc18Q80WC3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnrc18Q80WC3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnrc18Q80WC3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.35■■□□□ 1.17
Tnrc18Q80WC3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Tnrc18Q80WC3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.34■■□□□ 1.17
Tnrc18Q80WC3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Tnrc18Q80WC3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnrc18Q80WC3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc18Q80WC3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc18Q80WC3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc18Q80WC3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc18Q80WC3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc18Q80WC3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc18Q80WC3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc18Q80WC3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc18Q80WC3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc18Q80WC3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc18Q80WC3 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.31■■□□□ 1.16
Tnrc18Q80WC3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.3■■□□□ 1.16
Tnrc18Q80WC3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tnrc18Q80WC3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tnrc18Q80WC3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.3■■□□□ 1.16
Tnrc18Q80WC3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tnrc18Q80WC3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tnrc18Q80WC3 Gm45417-201ENSMUST00000209533 758 ntBASIC22.28■■□□□ 1.16
Tnrc18Q80WC3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc18Q80WC3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc18Q80WC3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.28■■□□□ 1.16
Tnrc18Q80WC3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.28■■□□□ 1.16
Tnrc18Q80WC3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tnrc18Q80WC3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Tnrc18Q80WC3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Tnrc18Q80WC3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc18Q80WC3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 Gm10399-202ENSMUST00000202768 748 ntBASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 Gm8495-201ENSMUST00000188740 694 ntBASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc18Q80WC3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc18Q80WC3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc18Q80WC3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc18Q80WC3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.22■■□□□ 1.15
Tnrc18Q80WC3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc18Q80WC3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc18Q80WC3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms