Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rif1Q6PR54 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rif1Q6PR54 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rif1Q6PR54 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rif1Q6PR54 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rif1Q6PR54 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rif1Q6PR54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.82■□□□□ 0.6
Rif1Q6PR54 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
Rif1Q6PR54 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rif1Q6PR54 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rif1Q6PR54 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.82■□□□□ 0.6
Rif1Q6PR54 Gm26833-201ENSMUST00000180899 440 ntBASIC18.81■□□□□ 0.6
Rif1Q6PR54 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rif1Q6PR54 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rif1Q6PR54 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rif1Q6PR54 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.81■□□□□ 0.6
Rif1Q6PR54 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rif1Q6PR54 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rif1Q6PR54 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.8■□□□□ 0.6
Rif1Q6PR54 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rif1Q6PR54 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.79■□□□□ 0.6
Rif1Q6PR54 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rif1Q6PR54 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rif1Q6PR54 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rif1Q6PR54 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rif1Q6PR54 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rif1Q6PR54 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rif1Q6PR54 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rif1Q6PR54 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rif1Q6PR54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rif1Q6PR54 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rif1Q6PR54 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rif1Q6PR54 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rif1Q6PR54 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.76■□□□□ 0.59
Rif1Q6PR54 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rif1Q6PR54 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rif1Q6PR54 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.76■□□□□ 0.59
Rif1Q6PR54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rif1Q6PR54 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.74■□□□□ 0.59
Rif1Q6PR54 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rif1Q6PR54 Gm27801-201ENSMUST00000184174 223 ntBASIC18.73■□□□□ 0.59
Rif1Q6PR54 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rif1Q6PR54 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.73■□□□□ 0.59
Rif1Q6PR54 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rif1Q6PR54 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rif1Q6PR54 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rif1Q6PR54 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rif1Q6PR54 Gm37179-201ENSMUST00000194862 823 ntBASIC18.72■□□□□ 0.59
Rif1Q6PR54 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rif1Q6PR54 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rif1Q6PR54 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rif1Q6PR54 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.71■□□□□ 0.59
Rif1Q6PR54 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rif1Q6PR54 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rif1Q6PR54 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.71■□□□□ 0.59
Rif1Q6PR54 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rif1Q6PR54 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rif1Q6PR54 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rif1Q6PR54 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.7■□□□□ 0.58
Rif1Q6PR54 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rif1Q6PR54 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rif1Q6PR54 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rif1Q6PR54 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.69■□□□□ 0.58
Rif1Q6PR54 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rif1Q6PR54 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rif1Q6PR54 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.68■□□□□ 0.58
Rif1Q6PR54 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rif1Q6PR54 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rif1Q6PR54 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.68■□□□□ 0.58
Rif1Q6PR54 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms