Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim45Q6PFY8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim45Q6PFY8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim45Q6PFY8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim45Q6PFY8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.43■□□□□ 0.86
Trim45Q6PFY8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim45Q6PFY8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim45Q6PFY8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim45Q6PFY8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.4■□□□□ 0.86
Trim45Q6PFY8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim45Q6PFY8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim45Q6PFY8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim45Q6PFY8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trim45Q6PFY8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim45Q6PFY8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim45Q6PFY8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim45Q6PFY8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim45Q6PFY8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim45Q6PFY8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim45Q6PFY8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.37■□□□□ 0.85
Trim45Q6PFY8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim45Q6PFY8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim45Q6PFY8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim45Q6PFY8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim45Q6PFY8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim45Q6PFY8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim45Q6PFY8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim45Q6PFY8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim45Q6PFY8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim45Q6PFY8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim45Q6PFY8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim45Q6PFY8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim45Q6PFY8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.33■□□□□ 0.85
Trim45Q6PFY8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim45Q6PFY8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim45Q6PFY8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.33■□□□□ 0.84
Trim45Q6PFY8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim45Q6PFY8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim45Q6PFY8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim45Q6PFY8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms