Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcd3Q6P9Z1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.88■□□□□ 0.77
Smarcd3Q6P9Z1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarcd3Q6P9Z1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcd3Q6P9Z1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.86■□□□□ 0.77
Smarcd3Q6P9Z1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarcd3Q6P9Z1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd3Q6P9Z1 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.84■□□□□ 0.77
Smarcd3Q6P9Z1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcd3Q6P9Z1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarcd3Q6P9Z1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.83■□□□□ 0.77
Smarcd3Q6P9Z1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarcd3Q6P9Z1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smarcd3Q6P9Z1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarcd3Q6P9Z1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.79■□□□□ 0.76
Smarcd3Q6P9Z1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.79■□□□□ 0.76
Smarcd3Q6P9Z1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarcd3Q6P9Z1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.79■□□□□ 0.76
Smarcd3Q6P9Z1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.78■□□□□ 0.76
Smarcd3Q6P9Z1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarcd3Q6P9Z1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smarcd3Q6P9Z1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarcd3Q6P9Z1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarcd3Q6P9Z1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd3Q6P9Z1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd3Q6P9Z1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarcd3Q6P9Z1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms