Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h11aQ6NZF1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h11aQ6NZF1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h11aQ6NZF1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Zc3h11aQ6NZF1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h11aQ6NZF1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h11aQ6NZF1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.15■□□□□ 0.98
Zc3h11aQ6NZF1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3h11aQ6NZF1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Zc3h11aQ6NZF1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h11aQ6NZF1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Zc3h11aQ6NZF1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Zc3h11aQ6NZF1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h11aQ6NZF1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3h11aQ6NZF1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3h11aQ6NZF1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.11■□□□□ 0.97
Zc3h11aQ6NZF1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Gm22567-201ENSMUST00000175542 342 ntBASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h11aQ6NZF1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h11aQ6NZF1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h11aQ6NZF1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h11aQ6NZF1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h11aQ6NZF1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h11aQ6NZF1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Zc3h11aQ6NZF1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3h11aQ6NZF1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3h11aQ6NZF1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3h11aQ6NZF1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Zc3h11aQ6NZF1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zc3h11aQ6NZF1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Zc3h11aQ6NZF1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Zc3h11aQ6NZF1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zc3h11aQ6NZF1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h11aQ6NZF1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.06■□□□□ 0.96
Zc3h11aQ6NZF1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Zc3h11aQ6NZF1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Zc3h11aQ6NZF1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3h11aQ6NZF1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h11aQ6NZF1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h11aQ6NZF1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h11aQ6NZF1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h11aQ6NZF1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h11aQ6NZF1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h11aQ6NZF1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h11aQ6NZF1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms