Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usf2Q64705 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usf2Q64705 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usf2Q64705 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usf2Q64705 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Usf2Q64705 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.26■□□□□ 0.51
Usf2Q64705 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usf2Q64705 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usf2Q64705 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usf2Q64705 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usf2Q64705 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usf2Q64705 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.24■□□□□ 0.51
Usf2Q64705 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Usf2Q64705 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usf2Q64705 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usf2Q64705 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usf2Q64705 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usf2Q64705 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usf2Q64705 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usf2Q64705 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usf2Q64705 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Usf2Q64705 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usf2Q64705 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usf2Q64705 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.23■□□□□ 0.51
Usf2Q64705 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usf2Q64705 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usf2Q64705 Gm9812-201ENSMUST00000061934 968 ntBASIC18.22■□□□□ 0.51
Usf2Q64705 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usf2Q64705 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usf2Q64705 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usf2Q64705 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Gm45364-201ENSMUST00000210883 159 ntBASIC18.21■□□□□ 0.51
Usf2Q64705 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usf2Q64705 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usf2Q64705 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Usf2Q64705 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.2■□□□□ 0.5
Usf2Q64705 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usf2Q64705 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Usf2Q64705 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usf2Q64705 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Usf2Q64705 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usf2Q64705 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usf2Q64705 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.19■□□□□ 0.5
Usf2Q64705 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.19■□□□□ 0.5
Usf2Q64705 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.19■□□□□ 0.5
Usf2Q64705 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usf2Q64705 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usf2Q64705 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usf2Q64705 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.18■□□□□ 0.5
Usf2Q64705 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.18■□□□□ 0.5
Usf2Q64705 Gm6311-201ENSMUST00000073790 878 ntBASIC18.18■□□□□ 0.5
Usf2Q64705 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usf2Q64705 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usf2Q64705 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usf2Q64705 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usf2Q64705 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usf2Q64705 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usf2Q64705 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usf2Q64705 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usf2Q64705 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.17■□□□□ 0.5
Usf2Q64705 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.17■□□□□ 0.5
Usf2Q64705 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.17■□□□□ 0.5
Usf2Q64705 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.17■□□□□ 0.5
Usf2Q64705 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usf2Q64705 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Usf2Q64705 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.16■□□□□ 0.5
Usf2Q64705 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usf2Q64705 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usf2Q64705 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usf2Q64705 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.15■□□□□ 0.5
Usf2Q64705 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usf2Q64705 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms