Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Commd3Q63829 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Commd3Q63829 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Commd3Q63829 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Commd3Q63829 Gm9397-201ENSMUST00000200125 605 ntBASIC18.08■□□□□ 0.48
Commd3Q63829 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Commd3Q63829 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Commd3Q63829 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Commd3Q63829 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Commd3Q63829 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Commd3Q63829 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Commd3Q63829 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.07■□□□□ 0.48
Commd3Q63829 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Commd3Q63829 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Commd3Q63829 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Commd3Q63829 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Commd3Q63829 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Commd3Q63829 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Commd3Q63829 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Commd3Q63829 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Commd3Q63829 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.05■□□□□ 0.48
Commd3Q63829 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Commd3Q63829 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Commd3Q63829 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Commd3Q63829 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Commd3Q63829 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Commd3Q63829 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Commd3Q63829 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Commd3Q63829 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Commd3Q63829 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.03■□□□□ 0.48
Commd3Q63829 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Commd3Q63829 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Commd3Q63829 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Commd3Q63829 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Commd3Q63829 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Commd3Q63829 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Commd3Q63829 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Commd3Q63829 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Commd3Q63829 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Commd3Q63829 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Commd3Q63829 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Commd3Q63829 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18■□□□□ 0.47
Commd3Q63829 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18■□□□□ 0.47
Commd3Q63829 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Commd3Q63829 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18■□□□□ 0.47
Commd3Q63829 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Commd3Q63829 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Commd3Q63829 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Commd3Q63829 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Commd3Q63829 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Commd3Q63829 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Commd3Q63829 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.99■□□□□ 0.47
Commd3Q63829 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Commd3Q63829 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.98■□□□□ 0.47
Commd3Q63829 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Commd3Q63829 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Commd3Q63829 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Commd3Q63829 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Commd3Q63829 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Commd3Q63829 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Commd3Q63829 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Commd3Q63829 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.96■□□□□ 0.47
Commd3Q63829 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.96■□□□□ 0.47
Commd3Q63829 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Commd3Q63829 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Commd3Q63829 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Commd3Q63829 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Commd3Q63829 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.95■□□□□ 0.46
Commd3Q63829 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Commd3Q63829 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Commd3Q63829 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Commd3Q63829 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Commd3Q63829 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Commd3Q63829 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Commd3Q63829 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Commd3Q63829 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms