Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxc1Q61572 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Foxc1Q61572 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Gm44487-201ENSMUST00000205145 325 ntBASIC15.76■□□□□ 0.11
Foxc1Q61572 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxc1Q61572 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
Foxc1Q61572 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxc1Q61572 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.75■□□□□ 0.11
Foxc1Q61572 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxc1Q61572 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxc1Q61572 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxc1Q61572 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxc1Q61572 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.74■□□□□ 0.11
Foxc1Q61572 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Foxc1Q61572 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Foxc1Q61572 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxc1Q61572 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.74■□□□□ 0.11
Foxc1Q61572 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.74■□□□□ 0.11
Foxc1Q61572 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxc1Q61572 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Foxc1Q61572 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Foxc1Q61572 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.73■□□□□ 0.11
Foxc1Q61572 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Foxc1Q61572 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Foxc1Q61572 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Foxc1Q61572 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxc1Q61572 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.72■□□□□ 0.11
Foxc1Q61572 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Foxc1Q61572 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxc1Q61572 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Foxc1Q61572 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Foxc1Q61572 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.71■□□□□ 0.11
Foxc1Q61572 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxc1Q61572 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxc1Q61572 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Foxc1Q61572 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Foxc1Q61572 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Foxc1Q61572 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Foxc1Q61572 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Foxc1Q61572 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxc1Q61572 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Foxc1Q61572 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Foxc1Q61572 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxc1Q61572 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxc1Q61572 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.68■□□□□ 0.1
Foxc1Q61572 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxc1Q61572 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxc1Q61572 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxc1Q61572 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxc1Q61572 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxc1Q61572 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Gm5921-201ENSMUST00000075898 882 ntBASIC15.67■□□□□ 0.1
Foxc1Q61572 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Foxc1Q61572 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxc1Q61572 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Foxc1Q61572 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.66■□□□□ 0.1
Foxc1Q61572 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxc1Q61572 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxc1Q61572 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxc1Q61572 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms