Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.83■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-1-dv6-1Q5R1D2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-1-dv6-1Q5R1D2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms