Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herc2Q4U2R1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herc2Q4U2R1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Herc2Q4U2R1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.65□□□□□ -0.22
Herc2Q4U2R1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Herc2Q4U2R1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Herc2Q4U2R1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Herc2Q4U2R1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Herc2Q4U2R1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Herc2Q4U2R1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Herc2Q4U2R1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Herc2Q4U2R1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Herc2Q4U2R1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Herc2Q4U2R1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Herc2Q4U2R1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Herc2Q4U2R1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Herc2Q4U2R1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Gm42569-201ENSMUST00000200539 472 ntBASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herc2Q4U2R1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.56□□□□□ -0.24
Herc2Q4U2R1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Gm43017-201ENSMUST00000198296 752 ntBASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc2Q4U2R1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms