Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc6aQ3UHK8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnrc6aQ3UHK8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnrc6aQ3UHK8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnrc6aQ3UHK8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnrc6aQ3UHK8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tnrc6aQ3UHK8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc6aQ3UHK8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc6aQ3UHK8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Tnrc6aQ3UHK8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tnrc6aQ3UHK8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc6aQ3UHK8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.43■□□□□ 0.86
Tnrc6aQ3UHK8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc6aQ3UHK8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc6aQ3UHK8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc6aQ3UHK8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc6aQ3UHK8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc6aQ3UHK8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnrc6aQ3UHK8 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.39■□□□□ 0.86
Tnrc6aQ3UHK8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.39■□□□□ 0.86
Tnrc6aQ3UHK8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tnrc6aQ3UHK8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.39■□□□□ 0.86
Tnrc6aQ3UHK8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.39■□□□□ 0.85
Tnrc6aQ3UHK8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tnrc6aQ3UHK8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.37■□□□□ 0.85
Tnrc6aQ3UHK8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Tnrc6aQ3UHK8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnrc6aQ3UHK8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.36■□□□□ 0.85
Tnrc6aQ3UHK8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms