Protein–RNA interactions for Protein: Q3UGP9

Lrrc58, Leucine-rich repeat-containing protein 58, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc58Q3UGP9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.29■■□□□ 1
Lrrc58Q3UGP9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc58Q3UGP9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc58Q3UGP9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lrrc58Q3UGP9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Lrrc58Q3UGP9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc58Q3UGP9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc58Q3UGP9 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrrc58Q3UGP9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.23■□□□□ 0.99
Lrrc58Q3UGP9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc58Q3UGP9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc58Q3UGP9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc58Q3UGP9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrrc58Q3UGP9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrrc58Q3UGP9 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.22■□□□□ 0.99
Lrrc58Q3UGP9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrrc58Q3UGP9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lrrc58Q3UGP9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrc58Q3UGP9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lrrc58Q3UGP9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Lrrc58Q3UGP9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrc58Q3UGP9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrc58Q3UGP9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.19■□□□□ 0.98
Lrrc58Q3UGP9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrc58Q3UGP9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrc58Q3UGP9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrc58Q3UGP9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrc58Q3UGP9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrc58Q3UGP9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrc58Q3UGP9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.16■□□□□ 0.98
Lrrc58Q3UGP9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrc58Q3UGP9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lrrc58Q3UGP9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrc58Q3UGP9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lrrc58Q3UGP9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrc58Q3UGP9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrc58Q3UGP9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrc58Q3UGP9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrc58Q3UGP9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrc58Q3UGP9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrc58Q3UGP9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms