Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrra1Q3U3V8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Xrra1Q3U3V8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.78■□□□□ 0.92
Xrra1Q3U3V8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrra1Q3U3V8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.77■□□□□ 0.92
Xrra1Q3U3V8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Xrra1Q3U3V8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Xrra1Q3U3V8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Xrra1Q3U3V8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrra1Q3U3V8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.76■□□□□ 0.91
Xrra1Q3U3V8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Xrra1Q3U3V8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Xrra1Q3U3V8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Xrra1Q3U3V8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Xrra1Q3U3V8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrra1Q3U3V8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrra1Q3U3V8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Xrra1Q3U3V8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Xrra1Q3U3V8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xrra1Q3U3V8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Xrra1Q3U3V8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.72■□□□□ 0.91
Xrra1Q3U3V8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Xrra1Q3U3V8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Xrra1Q3U3V8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.7■□□□□ 0.91
Xrra1Q3U3V8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Xrra1Q3U3V8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Xrra1Q3U3V8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Xrra1Q3U3V8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xrra1Q3U3V8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Xrra1Q3U3V8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Xrra1Q3U3V8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrra1Q3U3V8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.66■□□□□ 0.9
Xrra1Q3U3V8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xrra1Q3U3V8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Xrra1Q3U3V8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.66■□□□□ 0.9
Xrra1Q3U3V8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xrra1Q3U3V8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xrra1Q3U3V8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Xrra1Q3U3V8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Xrra1Q3U3V8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Xrra1Q3U3V8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xrra1Q3U3V8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xrra1Q3U3V8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xrra1Q3U3V8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Xrra1Q3U3V8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Xrra1Q3U3V8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms