Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim4P70271 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pdlim4P70271 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim4P70271 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pdlim4P70271 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim4P70271 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim4P70271 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim4P70271 Gm10420-201ENSMUST00000121713 882 ntBASIC17.98■□□□□ 0.47
Pdlim4P70271 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim4P70271 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.98■□□□□ 0.47
Pdlim4P70271 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim4P70271 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim4P70271 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.97■□□□□ 0.47
Pdlim4P70271 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim4P70271 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim4P70271 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim4P70271 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim4P70271 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.96■□□□□ 0.47
Pdlim4P70271 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim4P70271 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.96■□□□□ 0.47
Pdlim4P70271 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdlim4P70271 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim4P70271 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.95■□□□□ 0.46
Pdlim4P70271 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim4P70271 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pdlim4P70271 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim4P70271 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim4P70271 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pdlim4P70271 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.94■□□□□ 0.46
Pdlim4P70271 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim4P70271 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim4P70271 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim4P70271 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.93■□□□□ 0.46
Pdlim4P70271 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim4P70271 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim4P70271 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.92■□□□□ 0.46
Pdlim4P70271 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.92■□□□□ 0.46
Pdlim4P70271 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim4P70271 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim4P70271 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim4P70271 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pdlim4P70271 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim4P70271 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.91■□□□□ 0.46
Pdlim4P70271 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim4P70271 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim4P70271 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim4P70271 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim4P70271 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pdlim4P70271 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim4P70271 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim4P70271 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim4P70271 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim4P70271 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim4P70271 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim4P70271 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim4P70271 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.87■□□□□ 0.45
Pdlim4P70271 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pdlim4P70271 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.87■□□□□ 0.45
Pdlim4P70271 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.87■□□□□ 0.45
Pdlim4P70271 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim4P70271 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim4P70271 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pdlim4P70271 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.86■□□□□ 0.45
Pdlim4P70271 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pdlim4P70271 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim4P70271 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms