Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.41■■□□□ 1.02
Crnkl1P63154 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Crnkl1P63154 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Crnkl1P63154 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Crnkl1P63154 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.41■■□□□ 1.02
Crnkl1P63154 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Crnkl1P63154 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Crnkl1P63154 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Crnkl1P63154 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.38■■□□□ 1.01
Crnkl1P63154 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Crnkl1P63154 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.38■■□□□ 1.01
Crnkl1P63154 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Crnkl1P63154 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.37■■□□□ 1.01
Crnkl1P63154 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Crnkl1P63154 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Crnkl1P63154 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.37■■□□□ 1.01
Crnkl1P63154 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Crnkl1P63154 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Crnkl1P63154 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Crnkl1P63154 Gm7432-201ENSMUST00000210343 879 ntBASIC21.36■■□□□ 1.01
Crnkl1P63154 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Crnkl1P63154 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Crnkl1P63154 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Crnkl1P63154 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Crnkl1P63154 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Crnkl1P63154 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.34■■□□□ 1.01
Crnkl1P63154 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
Crnkl1P63154 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Crnkl1P63154 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Crnkl1P63154 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.34■■□□□ 1.01
Crnkl1P63154 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Crnkl1P63154 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Crnkl1P63154 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Crnkl1P63154 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.33■■□□□ 1
Crnkl1P63154 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Crnkl1P63154 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Crnkl1P63154 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Crnkl1P63154 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.32■■□□□ 1
Crnkl1P63154 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.32■■□□□ 1
Crnkl1P63154 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.32■■□□□ 1
Crnkl1P63154 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.32■■□□□ 1
Crnkl1P63154 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Crnkl1P63154 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Crnkl1P63154 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.31■■□□□ 1
Crnkl1P63154 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Crnkl1P63154 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Crnkl1P63154 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Crnkl1P63154 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.3■■□□□ 1
Crnkl1P63154 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.3■■□□□ 1
Crnkl1P63154 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.3■■□□□ 1
Crnkl1P63154 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.3■■□□□ 1
Crnkl1P63154 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.3■■□□□ 1
Crnkl1P63154 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Crnkl1P63154 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Crnkl1P63154 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Crnkl1P63154 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Crnkl1P63154 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.28■■□□□ 1
Crnkl1P63154 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Crnkl1P63154 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Crnkl1P63154 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.28■■□□□ 1
Crnkl1P63154 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Crnkl1P63154 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Crnkl1P63154 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.27■■□□□ 1
Crnkl1P63154 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Crnkl1P63154 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Crnkl1P63154 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Crnkl1P63154 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Crnkl1P63154 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Crnkl1P63154 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Crnkl1P63154 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Crnkl1P63154 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 190.4 ms