Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm22567-201ENSMUST00000175542 342 ntBASIC21.48■■□□□ 1.03
Lhx1P63006 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lhx1P63006 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lhx1P63006 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lhx1P63006 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lhx1P63006 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lhx1P63006 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lhx1P63006 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Lhx1P63006 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lhx1P63006 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lhx1P63006 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lhx1P63006 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lhx1P63006 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.46■■□□□ 1.03
Lhx1P63006 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lhx1P63006 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Lhx1P63006 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Lhx1P63006 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lhx1P63006 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lhx1P63006 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Lhx1P63006 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.45■■□□□ 1.02
Lhx1P63006 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lhx1P63006 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lhx1P63006 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lhx1P63006 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lhx1P63006 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.44■■□□□ 1.02
Lhx1P63006 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lhx1P63006 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lhx1P63006 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lhx1P63006 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.43■■□□□ 1.02
Lhx1P63006 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lhx1P63006 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
Lhx1P63006 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx1P63006 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lhx1P63006 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lhx1P63006 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.42■■□□□ 1.02
Lhx1P63006 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
Lhx1P63006 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.42■■□□□ 1.02
Lhx1P63006 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Lhx1P63006 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lhx1P63006 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx1P63006 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx1P63006 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx1P63006 Gm15546-201ENSMUST00000122095 826 ntBASIC21.41■■□□□ 1.02
Lhx1P63006 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx1P63006 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx1P63006 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lhx1P63006 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lhx1P63006 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lhx1P63006 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Lhx1P63006 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lhx1P63006 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lhx1P63006 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lhx1P63006 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.39■■□□□ 1.01
Lhx1P63006 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lhx1P63006 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
Lhx1P63006 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.38■■□□□ 1.01
Lhx1P63006 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lhx1P63006 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lhx1P63006 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.38■■□□□ 1.01
Lhx1P63006 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Lhx1P63006 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lhx1P63006 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lhx1P63006 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.37■■□□□ 1.01
Lhx1P63006 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.37■■□□□ 1.01
Lhx1P63006 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lhx1P63006 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx1P63006 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx1P63006 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx1P63006 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx1P63006 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lhx1P63006 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lhx1P63006 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx1P63006 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lhx1P63006 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx1P63006 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx1P63006 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx1P63006 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.35■■□□□ 1.01
Lhx1P63006 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lhx1P63006 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lhx1P63006 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx1P63006 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lhx1P63006 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Lhx1P63006 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lhx1P63006 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lhx1P63006 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.33■■□□□ 1.01
Lhx1P63006 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lhx1P63006 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Lhx1P63006 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lhx1P63006 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lhx1P63006 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms