Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpne2P59108 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne2P59108 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne2P59108 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne2P59108 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne2P59108 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne2P59108 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cpne2P59108 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cpne2P59108 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne2P59108 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Cpne2P59108 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne2P59108 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne2P59108 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.16■□□□□ 0.5
Cpne2P59108 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne2P59108 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cpne2P59108 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne2P59108 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne2P59108 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne2P59108 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpne2P59108 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.14■□□□□ 0.49
Cpne2P59108 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cpne2P59108 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpne2P59108 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne2P59108 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne2P59108 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne2P59108 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.13■□□□□ 0.49
Cpne2P59108 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne2P59108 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne2P59108 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne2P59108 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne2P59108 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cpne2P59108 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne2P59108 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne2P59108 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.12■□□□□ 0.49
Cpne2P59108 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne2P59108 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne2P59108 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cpne2P59108 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cpne2P59108 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
Cpne2P59108 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpne2P59108 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpne2P59108 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne2P59108 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpne2P59108 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.1■□□□□ 0.49
Cpne2P59108 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cpne2P59108 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne2P59108 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cpne2P59108 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpne2P59108 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cpne2P59108 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne2P59108 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpne2P59108 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne2P59108 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cpne2P59108 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Cpne2P59108 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.08■□□□□ 0.48
Cpne2P59108 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpne2P59108 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpne2P59108 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne2P59108 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne2P59108 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne2P59108 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpne2P59108 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.06■□□□□ 0.48
Cpne2P59108 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne2P59108 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne2P59108 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpne2P59108 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.05■□□□□ 0.48
Cpne2P59108 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.05■□□□□ 0.48
Cpne2P59108 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne2P59108 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne2P59108 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cpne2P59108 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpne2P59108 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 186.7 ms