Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Nkx2-1P50220 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nkx2-1P50220 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Gm6821-201ENSMUST00000107540 542 ntBASIC17.96■□□□□ 0.47
Nkx2-1P50220 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nkx2-1P50220 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-1P50220 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nkx2-1P50220 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-1P50220 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-1P50220 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-1P50220 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nkx2-1P50220 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.95■□□□□ 0.46
Nkx2-1P50220 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.94■□□□□ 0.46
Nkx2-1P50220 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nkx2-1P50220 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-1P50220 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.92■□□□□ 0.46
Nkx2-1P50220 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nkx2-1P50220 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-1P50220 Gm8503-201ENSMUST00000118131 455 ntBASIC17.9■□□□□ 0.46
Nkx2-1P50220 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-1P50220 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Nkx2-1P50220 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-1P50220 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx2-1P50220 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-1P50220 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.89■□□□□ 0.45
Nkx2-1P50220 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nkx2-1P50220 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-1P50220 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-1P50220 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-1P50220 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-1P50220 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.87■□□□□ 0.45
Nkx2-1P50220 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-1P50220 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-1P50220 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-1P50220 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-1P50220 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.86■□□□□ 0.45
Nkx2-1P50220 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-1P50220 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-1P50220 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-1P50220 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-1P50220 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-1P50220 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-1P50220 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-1P50220 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms