Protein–RNA interactions for Protein: P49615

Cdk5, Cyclin-dependent-like kinase 5, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5P49615 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5P49615 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cdk5P49615 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5P49615 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5P49615 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdk5P49615 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdk5P49615 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Cdk5P49615 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdk5P49615 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdk5P49615 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5P49615 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdk5P49615 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdk5P49615 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdk5P49615 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5P49615 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Cdk5P49615 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cdk5P49615 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5P49615 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5P49615 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdk5P49615 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdk5P49615 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk5P49615 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk5P49615 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk5P49615 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdk5P49615 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cdk5P49615 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdk5P49615 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.66■□□□□ 0.74
Cdk5P49615 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdk5P49615 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdk5P49615 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdk5P49615 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.65■□□□□ 0.74
Cdk5P49615 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdk5P49615 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdk5P49615 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5P49615 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.65■□□□□ 0.74
Cdk5P49615 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdk5P49615 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.65■□□□□ 0.74
Cdk5P49615 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdk5P49615 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdk5P49615 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdk5P49615 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.64■□□□□ 0.73
Cdk5P49615 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cdk5P49615 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5P49615 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5P49615 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5P49615 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Cdk5P49615 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5P49615 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5P49615 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5P49615 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdk5P49615 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdk5P49615 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5P49615 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5P49615 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdk5P49615 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5P49615 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.61■□□□□ 0.73
Cdk5P49615 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5P49615 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5P49615 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5P49615 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.59■□□□□ 0.73
Cdk5P49615 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5P49615 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5P49615 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5P49615 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5P49615 Gm7432-201ENSMUST00000210343 879 ntBASIC19.58■□□□□ 0.72
Cdk5P49615 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5P49615 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Cdk5P49615 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Cdk5P49615 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5P49615 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5P49615 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5P49615 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.57■□□□□ 0.72
Cdk5P49615 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5P49615 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5P49615 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdk5P49615 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cdk5P49615 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cdk5P49615 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5P49615 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5P49615 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5P49615 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.56■□□□□ 0.72
Cdk5P49615 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdk5P49615 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdk5P49615 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdk5P49615 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.55■□□□□ 0.72
Cdk5P49615 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk5P49615 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk5P49615 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cdk5P49615 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms