Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LdlrP35951 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LdlrP35951 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LdlrP35951 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
LdlrP35951 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LdlrP35951 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LdlrP35951 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LdlrP35951 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.58■■□□□ 1.05
LdlrP35951 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.58■■□□□ 1.05
LdlrP35951 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LdlrP35951 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LdlrP35951 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LdlrP35951 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.57■■□□□ 1.04
LdlrP35951 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.57■■□□□ 1.04
LdlrP35951 Gm4799-201ENSMUST00000095396 657 ntBASIC21.57■■□□□ 1.04
LdlrP35951 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LdlrP35951 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LdlrP35951 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LdlrP35951 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LdlrP35951 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.55■■□□□ 1.04
LdlrP35951 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LdlrP35951 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.55■■□□□ 1.04
LdlrP35951 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LdlrP35951 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LdlrP35951 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.54■■□□□ 1.04
LdlrP35951 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LdlrP35951 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.54■■□□□ 1.04
LdlrP35951 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LdlrP35951 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
LdlrP35951 Gm16437-201ENSMUST00000025669 507 ntBASIC21.53■■□□□ 1.04
LdlrP35951 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LdlrP35951 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LdlrP35951 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.53■■□□□ 1.04
LdlrP35951 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LdlrP35951 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LdlrP35951 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.52■■□□□ 1.04
LdlrP35951 Gm22567-201ENSMUST00000175542 342 ntBASIC21.52■■□□□ 1.04
LdlrP35951 Gm9812-201ENSMUST00000061934 968 ntBASIC21.52■■□□□ 1.04
LdlrP35951 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LdlrP35951 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LdlrP35951 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LdlrP35951 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
LdlrP35951 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LdlrP35951 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.5■■□□□ 1.03
LdlrP35951 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.5■■□□□ 1.03
LdlrP35951 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.5■■□□□ 1.03
LdlrP35951 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.5■■□□□ 1.03
LdlrP35951 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LdlrP35951 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.49■■□□□ 1.03
LdlrP35951 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LdlrP35951 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LdlrP35951 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.49■■□□□ 1.03
LdlrP35951 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LdlrP35951 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LdlrP35951 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LdlrP35951 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.48■■□□□ 1.03
LdlrP35951 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LdlrP35951 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LdlrP35951 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LdlrP35951 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LdlrP35951 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.47■■□□□ 1.03
LdlrP35951 Mir3960-201ENSMUST00000198213 73 ntBASIC21.47■■□□□ 1.03
LdlrP35951 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.47■■□□□ 1.03
LdlrP35951 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.47■■□□□ 1.03
LdlrP35951 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LdlrP35951 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LdlrP35951 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LdlrP35951 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
LdlrP35951 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.46■■□□□ 1.03
LdlrP35951 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
LdlrP35951 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
LdlrP35951 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.45■■□□□ 1.02
LdlrP35951 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LdlrP35951 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.45■■□□□ 1.02
LdlrP35951 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.45■■□□□ 1.02
LdlrP35951 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms