Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.29■□□□□ 0.52
Col8a2P25318 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col8a2P25318 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col8a2P25318 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.29■□□□□ 0.52
Col8a2P25318 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col8a2P25318 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col8a2P25318 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col8a2P25318 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col8a2P25318 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col8a2P25318 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col8a2P25318 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col8a2P25318 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col8a2P25318 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col8a2P25318 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.27■□□□□ 0.52
Col8a2P25318 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col8a2P25318 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.27■□□□□ 0.52
Col8a2P25318 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col8a2P25318 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col8a2P25318 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col8a2P25318 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col8a2P25318 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col8a2P25318 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.25■□□□□ 0.51
Col8a2P25318 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.25■□□□□ 0.51
Col8a2P25318 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.25■□□□□ 0.51
Col8a2P25318 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col8a2P25318 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col8a2P25318 Gm5812-201ENSMUST00000061073 957 ntBASIC18.24■□□□□ 0.51
Col8a2P25318 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col8a2P25318 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Col8a2P25318 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col8a2P25318 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Col8a2P25318 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.23■□□□□ 0.51
Col8a2P25318 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col8a2P25318 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col8a2P25318 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col8a2P25318 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.22■□□□□ 0.51
Col8a2P25318 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.22■□□□□ 0.51
Col8a2P25318 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col8a2P25318 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col8a2P25318 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.21■□□□□ 0.51
Col8a2P25318 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.21■□□□□ 0.51
Col8a2P25318 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col8a2P25318 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col8a2P25318 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Col8a2P25318 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Col8a2P25318 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.2■□□□□ 0.5
Col8a2P25318 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col8a2P25318 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col8a2P25318 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col8a2P25318 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col8a2P25318 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col8a2P25318 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col8a2P25318 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Col8a2P25318 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.19■□□□□ 0.5
Col8a2P25318 Gm45444-201ENSMUST00000211394 898 ntBASIC18.19■□□□□ 0.5
Col8a2P25318 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col8a2P25318 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col8a2P25318 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col8a2P25318 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.18■□□□□ 0.5
Col8a2P25318 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col8a2P25318 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col8a2P25318 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Col8a2P25318 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col8a2P25318 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col8a2P25318 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col8a2P25318 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col8a2P25318 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col8a2P25318 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col8a2P25318 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col8a2P25318 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col8a2P25318 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Col8a2P25318 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col8a2P25318 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Col8a2P25318 Gm43566-201ENSMUST00000196851 808 ntBASIC18.16■□□□□ 0.5
Col8a2P25318 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col8a2P25318 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col8a2P25318 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.16■□□□□ 0.5
Col8a2P25318 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col8a2P25318 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms