Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.67■□□□□ 0.74
Cbx3P23198 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cbx3P23198 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx3P23198 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx3P23198 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.66■□□□□ 0.74
Cbx3P23198 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx3P23198 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx3P23198 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cbx3P23198 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cbx3P23198 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cbx3P23198 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx3P23198 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx3P23198 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx3P23198 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx3P23198 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx3P23198 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.64■□□□□ 0.73
Cbx3P23198 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.64■□□□□ 0.73
Cbx3P23198 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx3P23198 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx3P23198 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx3P23198 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx3P23198 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx3P23198 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cbx3P23198 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cbx3P23198 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.63■□□□□ 0.73
Cbx3P23198 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
Cbx3P23198 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx3P23198 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx3P23198 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx3P23198 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cbx3P23198 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cbx3P23198 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx3P23198 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx3P23198 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx3P23198 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.61■□□□□ 0.73
Cbx3P23198 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.6■□□□□ 0.73
Cbx3P23198 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.6■□□□□ 0.73
Cbx3P23198 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cbx3P23198 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx3P23198 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx3P23198 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx3P23198 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cbx3P23198 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx3P23198 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.58■□□□□ 0.72
Cbx3P23198 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.58■□□□□ 0.72
Cbx3P23198 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx3P23198 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx3P23198 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.58■□□□□ 0.72
Cbx3P23198 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx3P23198 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cbx3P23198 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cbx3P23198 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cbx3P23198 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cbx3P23198 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.57■□□□□ 0.72
Cbx3P23198 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.57■□□□□ 0.72
Cbx3P23198 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.57■□□□□ 0.72
Cbx3P23198 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cbx3P23198 Gm9397-201ENSMUST00000200125 605 ntBASIC19.56■□□□□ 0.72
Cbx3P23198 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cbx3P23198 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.55■□□□□ 0.72
Cbx3P23198 Gm24970-201ENSMUST00000175582 82 ntBASIC19.55■□□□□ 0.72
Cbx3P23198 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.55■□□□□ 0.72
Cbx3P23198 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.55■□□□□ 0.72
Cbx3P23198 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cbx3P23198 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cbx3P23198 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cbx3P23198 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cbx3P23198 Golph3-202ENSMUST00000226517 2359 ntBASIC19.55■□□□□ 0.72
Cbx3P23198 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cbx3P23198 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.54■□□□□ 0.72
Cbx3P23198 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cbx3P23198 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cbx3P23198 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.53■□□□□ 0.72
Cbx3P23198 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cbx3P23198 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cbx3P23198 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms