Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Tnfrsf9P20334 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Tnfrsf9P20334 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf9P20334 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf9P20334 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfrsf9P20334 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf9P20334 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfrsf9P20334 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf9P20334 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Etf1-202ENSMUST00000180351 108 ntBASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf9P20334 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf9P20334 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf9P20334 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf9P20334 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf9P20334 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf9P20334 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf9P20334 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf9P20334 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf9P20334 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Tnfrsf9P20334 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.39■□□□□ 0.38
Tnfrsf9P20334 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf9P20334 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf9P20334 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tnfrsf9P20334 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf9P20334 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf9P20334 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf9P20334 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms