Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cntn1P12960 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntn1P12960 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntn1P12960 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.88■□□□□ 0.93
Cntn1P12960 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cntn1P12960 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cntn1P12960 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cntn1P12960 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cntn1P12960 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntn1P12960 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntn1P12960 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cntn1P12960 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cntn1P12960 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.86■□□□□ 0.93
Cntn1P12960 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cntn1P12960 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.86■□□□□ 0.93
Cntn1P12960 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.86■□□□□ 0.93
Cntn1P12960 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cntn1P12960 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntn1P12960 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.84■□□□□ 0.93
Cntn1P12960 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cntn1P12960 Gm15546-201ENSMUST00000122095 826 ntBASIC20.84■□□□□ 0.93
Cntn1P12960 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.84■□□□□ 0.93
Cntn1P12960 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cntn1P12960 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cntn1P12960 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntn1P12960 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cntn1P12960 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.83■□□□□ 0.93
Cntn1P12960 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cntn1P12960 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.83■□□□□ 0.93
Cntn1P12960 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cntn1P12960 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cntn1P12960 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cntn1P12960 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.82■□□□□ 0.92
Cntn1P12960 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.82■□□□□ 0.92
Cntn1P12960 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.82■□□□□ 0.92
Cntn1P12960 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntn1P12960 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntn1P12960 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntn1P12960 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cntn1P12960 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cntn1P12960 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cntn1P12960 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cntn1P12960 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.81■□□□□ 0.92
Cntn1P12960 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.8■□□□□ 0.92
Cntn1P12960 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.8■□□□□ 0.92
Cntn1P12960 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cntn1P12960 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Cntn1P12960 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cntn1P12960 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.8■□□□□ 0.92
Cntn1P12960 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cntn1P12960 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
Cntn1P12960 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cntn1P12960 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cntn1P12960 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cntn1P12960 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.79■□□□□ 0.92
Cntn1P12960 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 Gm15820-201ENSMUST00000201566 728 ntBASIC20.78■□□□□ 0.92
Cntn1P12960 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.78■□□□□ 0.92
Cntn1P12960 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cntn1P12960 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cntn1P12960 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cntn1P12960 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cntn1P12960 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cntn1P12960 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cntn1P12960 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cntn1P12960 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cntn1P12960 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cntn1P12960 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cntn1P12960 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cntn1P12960 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cntn1P12960 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cntn1P12960 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cntn1P12960 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cntn1P12960 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cntn1P12960 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cntn1P12960 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cntn1P12960 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cntn1P12960 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cntn1P12960 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.74■□□□□ 0.91
Cntn1P12960 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.74■□□□□ 0.91
Cntn1P12960 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cntn1P12960 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cntn1P12960 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cntn1P12960 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Cntn1P12960 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.73■□□□□ 0.91
Cntn1P12960 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cntn1P12960 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cntn1P12960 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cntn1P12960 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cntn1P12960 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cntn1P12960 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms