Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa1P09022 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa1P09022 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.63■□□□□ 0.41
Hoxa1P09022 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Hoxa1P09022 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa1P09022 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hoxa1P09022 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.62■□□□□ 0.41
Hoxa1P09022 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa1P09022 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hoxa1P09022 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.61■□□□□ 0.41
Hoxa1P09022 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa1P09022 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hoxa1P09022 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa1P09022 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxa1P09022 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa1P09022 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa1P09022 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa1P09022 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.6■□□□□ 0.41
Hoxa1P09022 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hoxa1P09022 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa1P09022 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Hoxa1P09022 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxa1P09022 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hoxa1P09022 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.59■□□□□ 0.41
Hoxa1P09022 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hoxa1P09022 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa1P09022 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Hoxa1P09022 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.58■□□□□ 0.41
Hoxa1P09022 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Hoxa1P09022 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Hoxa1P09022 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa1P09022 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxa1P09022 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxa1P09022 Gm6311-201ENSMUST00000073790 878 ntBASIC17.58■□□□□ 0.4
Hoxa1P09022 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Hoxa1P09022 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa1P09022 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa1P09022 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxa1P09022 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa1P09022 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa1P09022 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa1P09022 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa1P09022 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa1P09022 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hoxa1P09022 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa1P09022 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa1P09022 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.55■□□□□ 0.4
Hoxa1P09022 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa1P09022 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa1P09022 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa1P09022 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa1P09022 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxa1P09022 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hoxa1P09022 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.54■□□□□ 0.4
Hoxa1P09022 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa1P09022 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa1P09022 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa1P09022 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa1P09022 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa1P09022 Gm22567-201ENSMUST00000175542 342 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms