Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01804 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01804 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01804 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01804 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01804 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01804 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01804 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01804 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01804 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
P01804 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.75■□□□□ 0.59
P01804 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.74■□□□□ 0.59
P01804 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01804 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01804 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P01804 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01804 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01804 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
P01804 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01804 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
P01804 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01804 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01804 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
P01804 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01804 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
P01804 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01804 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01804 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.72■□□□□ 0.59
P01804 Gm22567-201ENSMUST00000175542 342 ntBASIC18.72■□□□□ 0.59
P01804 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01804 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.71■□□□□ 0.59
P01804 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
P01804 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01804 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
P01804 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.7■□□□□ 0.58
P01804 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.7■□□□□ 0.58
P01804 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01804 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01804 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.69■□□□□ 0.58
P01804 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01804 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.69■□□□□ 0.58
P01804 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
P01804 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.68■□□□□ 0.58
P01804 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
P01804 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01804 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01804 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.67■□□□□ 0.58
P01804 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.67■□□□□ 0.58
P01804 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01804 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01804 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P01804 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
P01804 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01804 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
P01804 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
P01804 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01804 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01804 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01804 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
P01804 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P01804 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
P01804 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.65■□□□□ 0.58
P01804 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.65■□□□□ 0.58
P01804 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P01804 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01804 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
P01804 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
P01804 Gm5921-201ENSMUST00000075898 882 ntBASIC18.64■□□□□ 0.57
P01804 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01804 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
P01804 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.63■□□□□ 0.57
P01804 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01804 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.63■□□□□ 0.57
P01804 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01804 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.63■□□□□ 0.57
P01804 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms