Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Syn1O88935 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Syn1O88935 Gm18284-201ENSMUST00000172604 624 ntBASIC22.67■■□□□ 1.22
Syn1O88935 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Syn1O88935 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Syn1O88935 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Syn1O88935 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Syn1O88935 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Syn1O88935 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Syn1O88935 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Syn1O88935 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Syn1O88935 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Syn1O88935 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
Syn1O88935 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Syn1O88935 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.65■■□□□ 1.22
Syn1O88935 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Syn1O88935 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Syn1O88935 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Syn1O88935 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Syn1O88935 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Syn1O88935 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Syn1O88935 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Syn1O88935 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Syn1O88935 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Syn1O88935 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.63■■□□□ 1.21
Syn1O88935 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Syn1O88935 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.62■■□□□ 1.21
Syn1O88935 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Syn1O88935 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Syn1O88935 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.61■■□□□ 1.21
Syn1O88935 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Syn1O88935 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.61■■□□□ 1.21
Syn1O88935 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Syn1O88935 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Syn1O88935 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Syn1O88935 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.6■■□□□ 1.21
Syn1O88935 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Syn1O88935 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Syn1O88935 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Syn1O88935 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Syn1O88935 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.59■■□□□ 1.21
Syn1O88935 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Syn1O88935 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Syn1O88935 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.59■■□□□ 1.21
Syn1O88935 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.59■■□□□ 1.21
Syn1O88935 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.59■■□□□ 1.21
Syn1O88935 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.58■■□□□ 1.21
Syn1O88935 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.58■■□□□ 1.21
Syn1O88935 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.58■■□□□ 1.21
Syn1O88935 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Syn1O88935 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Syn1O88935 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.57■■□□□ 1.2
Syn1O88935 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Syn1O88935 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Syn1O88935 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Syn1O88935 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Syn1O88935 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.56■■□□□ 1.2
Syn1O88935 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Syn1O88935 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.56■■□□□ 1.2
Syn1O88935 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Syn1O88935 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Syn1O88935 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.56■■□□□ 1.2
Syn1O88935 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Syn1O88935 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.55■■□□□ 1.2
Syn1O88935 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Syn1O88935 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Syn1O88935 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.55■■□□□ 1.2
Syn1O88935 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Syn1O88935 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Syn1O88935 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.54■■□□□ 1.2
Syn1O88935 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Syn1O88935 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Syn1O88935 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Syn1O88935 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Syn1O88935 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Syn1O88935 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Syn1O88935 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Syn1O88935 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Syn1O88935 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Syn1O88935 Golgb1-201ENSMUST00000023534 498 ntBASIC22.53■■□□□ 1.2
Syn1O88935 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Syn1O88935 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Syn1O88935 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Syn1O88935 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Syn1O88935 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Syn1O88935 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Syn1O88935 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Syn1O88935 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Syn1O88935 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Syn1O88935 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.51■■□□□ 1.19
Syn1O88935 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Syn1O88935 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.5■■□□□ 1.19
Syn1O88935 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.5■■□□□ 1.19
Syn1O88935 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms