Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.1■□□□□ 0.97
ClppO88696 Gm45444-201ENSMUST00000211394 898 ntBASIC21.1■□□□□ 0.97
ClppO88696 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClppO88696 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ClppO88696 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ClppO88696 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClppO88696 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ClppO88696 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.09■□□□□ 0.97
ClppO88696 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ClppO88696 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.08■□□□□ 0.97
ClppO88696 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ClppO88696 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ClppO88696 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ClppO88696 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ClppO88696 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.07■□□□□ 0.96
ClppO88696 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
ClppO88696 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ClppO88696 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ClppO88696 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ClppO88696 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ClppO88696 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ClppO88696 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.06■□□□□ 0.96
ClppO88696 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ClppO88696 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ClppO88696 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.06■□□□□ 0.96
ClppO88696 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
ClppO88696 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClppO88696 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClppO88696 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ClppO88696 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.05■□□□□ 0.96
ClppO88696 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClppO88696 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClppO88696 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ClppO88696 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ClppO88696 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.05■□□□□ 0.96
ClppO88696 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.04■□□□□ 0.96
ClppO88696 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ClppO88696 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ClppO88696 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClppO88696 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClppO88696 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ClppO88696 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ClppO88696 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ClppO88696 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ClppO88696 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClppO88696 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ClppO88696 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.01■□□□□ 0.95
ClppO88696 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.01■□□□□ 0.95
ClppO88696 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClppO88696 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ClppO88696 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClppO88696 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ClppO88696 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
ClppO88696 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21■□□□□ 0.95
ClppO88696 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
ClppO88696 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
ClppO88696 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ClppO88696 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ClppO88696 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21■□□□□ 0.95
ClppO88696 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ClppO88696 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClppO88696 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ClppO88696 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ClppO88696 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClppO88696 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ClppO88696 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ClppO88696 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ClppO88696 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.98■□□□□ 0.95
ClppO88696 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.98■□□□□ 0.95
ClppO88696 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ClppO88696 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.97■□□□□ 0.95
ClppO88696 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClppO88696 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ClppO88696 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.97■□□□□ 0.95
ClppO88696 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClppO88696 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.97■□□□□ 0.95
ClppO88696 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClppO88696 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClppO88696 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ClppO88696 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.96■□□□□ 0.95
ClppO88696 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Gm13238-201ENSMUST00000117655 780 ntBASIC20.96■□□□□ 0.95
ClppO88696 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ClppO88696 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms