Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.93■■□□□ 1.1
Cacna1hO88427 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1hO88427 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1hO88427 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1hO88427 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1hO88427 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1hO88427 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.91■■□□□ 1.1
Cacna1hO88427 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna1hO88427 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.9■■□□□ 1.1
Cacna1hO88427 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.9■■□□□ 1.1
Cacna1hO88427 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.9■■□□□ 1.1
Cacna1hO88427 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.9■■□□□ 1.1
Cacna1hO88427 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1hO88427 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna1hO88427 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna1hO88427 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna1hO88427 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cacna1hO88427 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna1hO88427 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna1hO88427 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Cacna1hO88427 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna1hO88427 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna1hO88427 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cacna1hO88427 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.88■■□□□ 1.09
Cacna1hO88427 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna1hO88427 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
Cacna1hO88427 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacna1hO88427 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Cacna1hO88427 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1hO88427 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1hO88427 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1hO88427 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1hO88427 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.85■■□□□ 1.09
Cacna1hO88427 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cacna1hO88427 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1hO88427 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1hO88427 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.84■■□□□ 1.09
Cacna1hO88427 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.84■■□□□ 1.09
Cacna1hO88427 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1hO88427 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1hO88427 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1hO88427 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.09
Cacna1hO88427 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Cacna1hO88427 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cacna1hO88427 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Cacna1hO88427 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cacna1hO88427 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cacna1hO88427 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.83■■□□□ 1.09
Cacna1hO88427 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cacna1hO88427 Gm10399-202ENSMUST00000202768 748 ntBASIC21.83■■□□□ 1.08
Cacna1hO88427 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1hO88427 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1hO88427 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.81■■□□□ 1.08
Cacna1hO88427 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
Cacna1hO88427 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1hO88427 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1hO88427 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1hO88427 Gm7291-201ENSMUST00000199147 382 ntBASIC21.81■■□□□ 1.08
Cacna1hO88427 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.81■■□□□ 1.08
Cacna1hO88427 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1hO88427 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1hO88427 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.79■■□□□ 1.08
Cacna1hO88427 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.79■■□□□ 1.08
Cacna1hO88427 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Cacna1hO88427 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.79■■□□□ 1.08
Cacna1hO88427 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1hO88427 Gm27405-201ENSMUST00000184201 112 ntBASIC21.78■■□□□ 1.08
Cacna1hO88427 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1hO88427 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1hO88427 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1hO88427 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1hO88427 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.77■■□□□ 1.08
Cacna1hO88427 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.77■■□□□ 1.08
Cacna1hO88427 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cacna1hO88427 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1hO88427 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1hO88427 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cacna1hO88427 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1hO88427 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.76■■□□□ 1.07
Cacna1hO88427 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1hO88427 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1hO88427 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.75■■□□□ 1.07
Cacna1hO88427 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1hO88427 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1hO88427 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cacna1hO88427 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1hO88427 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1hO88427 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1hO88427 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.74■■□□□ 1.07
Cacna1hO88427 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms