Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdh12O55134 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdh12O55134 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh12O55134 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh12O55134 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh12O55134 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh12O55134 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh12O55134 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh12O55134 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh12O55134 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh12O55134 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh12O55134 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh12O55134 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdh12O55134 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh12O55134 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh12O55134 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh12O55134 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdh12O55134 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh12O55134 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh12O55134 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh12O55134 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh12O55134 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh12O55134 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh12O55134 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh12O55134 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdh12O55134 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh12O55134 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdh12O55134 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh12O55134 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh12O55134 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh12O55134 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.62■□□□□ 0.73
Pcdh12O55134 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh12O55134 Gm10420-201ENSMUST00000121713 882 ntBASIC19.62■□□□□ 0.73
Pcdh12O55134 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh12O55134 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh12O55134 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh12O55134 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh12O55134 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh12O55134 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh12O55134 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh12O55134 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh12O55134 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh12O55134 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh12O55134 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdh12O55134 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh12O55134 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdh12O55134 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh12O55134 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh12O55134 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh12O55134 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.58■□□□□ 0.72
Pcdh12O55134 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh12O55134 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdh12O55134 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdh12O55134 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh12O55134 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.57■□□□□ 0.72
Pcdh12O55134 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh12O55134 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh12O55134 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdh12O55134 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdh12O55134 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdh12O55134 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
Pcdh12O55134 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdh12O55134 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh12O55134 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh12O55134 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh12O55134 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdh12O55134 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh12O55134 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdh12O55134 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh12O55134 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdh12O55134 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.53■□□□□ 0.72
Pcdh12O55134 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh12O55134 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdh12O55134 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdh12O55134 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh12O55134 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh12O55134 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh12O55134 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms