Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Kcnu1O54982 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kcnu1O54982 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnu1O54982 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Kcnu1O54982 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Kcnu1O54982 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnu1O54982 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnu1O54982 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnu1O54982 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Kcnu1O54982 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.27■■□□□ 1.32
Kcnu1O54982 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnu1O54982 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnu1O54982 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnu1O54982 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnu1O54982 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnu1O54982 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnu1O54982 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnu1O54982 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kcnu1O54982 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnu1O54982 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnu1O54982 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnu1O54982 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnu1O54982 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.24■■□□□ 1.31
Kcnu1O54982 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.24■■□□□ 1.31
Kcnu1O54982 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnu1O54982 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.24■■□□□ 1.31
Kcnu1O54982 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnu1O54982 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Kcnu1O54982 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnu1O54982 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnu1O54982 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnu1O54982 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnu1O54982 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Kcnu1O54982 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnu1O54982 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnu1O54982 Gm11175-201ENSMUST00000116172 543 ntBASIC23.22■■□□□ 1.31
Kcnu1O54982 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnu1O54982 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnu1O54982 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Kcnu1O54982 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnu1O54982 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnu1O54982 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnu1O54982 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnu1O54982 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnu1O54982 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnu1O54982 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnu1O54982 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Kcnu1O54982 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnu1O54982 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnu1O54982 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.2■■□□□ 1.3
Kcnu1O54982 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.2■■□□□ 1.3
Kcnu1O54982 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnu1O54982 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Kcnu1O54982 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Kcnu1O54982 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnu1O54982 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnu1O54982 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnu1O54982 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnu1O54982 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.19■■□□□ 1.3
Kcnu1O54982 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnu1O54982 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnu1O54982 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnu1O54982 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.18■■□□□ 1.3
Kcnu1O54982 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.18■■□□□ 1.3
Kcnu1O54982 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnu1O54982 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnu1O54982 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnu1O54982 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnu1O54982 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnu1O54982 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Kcnu1O54982 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcnu1O54982 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcnu1O54982 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.16■■□□□ 1.3
Kcnu1O54982 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.16■■□□□ 1.3
Kcnu1O54982 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.16■■□□□ 1.3
Kcnu1O54982 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcnu1O54982 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kcnu1O54982 Gm27502-201ENSMUST00000183495 199 ntBASIC23.15■■□□□ 1.3
Kcnu1O54982 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.15■■□□□ 1.3
Kcnu1O54982 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Kcnu1O54982 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.14■■□□□ 1.29
Kcnu1O54982 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Kcnu1O54982 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kcnu1O54982 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.14■■□□□ 1.29
Kcnu1O54982 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kcnu1O54982 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kcnu1O54982 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kcnu1O54982 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.13■■□□□ 1.29
Kcnu1O54982 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Kcnu1O54982 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.12■■□□□ 1.29
Kcnu1O54982 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Kcnu1O54982 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Kcnu1O54982 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Kcnu1O54982 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Kcnu1O54982 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms