Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Clk3O35492 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk3O35492 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.57■□□□□ 0.88
Clk3O35492 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk3O35492 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.57■□□□□ 0.88
Clk3O35492 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Clk3O35492 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk3O35492 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk3O35492 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clk3O35492 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clk3O35492 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk3O35492 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk3O35492 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk3O35492 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.56■□□□□ 0.88
Clk3O35492 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk3O35492 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk3O35492 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk3O35492 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Clk3O35492 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Clk3O35492 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk3O35492 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clk3O35492 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk3O35492 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk3O35492 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk3O35492 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.54■□□□□ 0.88
Clk3O35492 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk3O35492 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk3O35492 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk3O35492 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk3O35492 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Clk3O35492 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clk3O35492 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Clk3O35492 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.53■□□□□ 0.88
Clk3O35492 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.53■□□□□ 0.88
Clk3O35492 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Clk3O35492 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clk3O35492 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.53■□□□□ 0.88
Clk3O35492 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk3O35492 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk3O35492 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clk3O35492 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clk3O35492 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clk3O35492 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.51■□□□□ 0.87
Clk3O35492 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk3O35492 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk3O35492 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk3O35492 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk3O35492 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clk3O35492 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clk3O35492 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk3O35492 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk3O35492 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.5■□□□□ 0.87
Clk3O35492 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Clk3O35492 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk3O35492 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Clk3O35492 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk3O35492 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk3O35492 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk3O35492 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Clk3O35492 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk3O35492 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.48■□□□□ 0.87
Clk3O35492 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk3O35492 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clk3O35492 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk3O35492 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk3O35492 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk3O35492 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Clk3O35492 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clk3O35492 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk3O35492 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.46■□□□□ 0.87
Clk3O35492 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clk3O35492 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.46■□□□□ 0.87
Clk3O35492 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clk3O35492 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clk3O35492 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Clk3O35492 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clk3O35492 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk3O35492 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk3O35492 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.45■□□□□ 0.86
Clk3O35492 Mir6538-201ENSMUST00000183713 110 ntBASIC20.45■□□□□ 0.86
Clk3O35492 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clk3O35492 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk3O35492 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clk3O35492 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk3O35492 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clk3O35492 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clk3O35492 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clk3O35492 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Clk3O35492 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clk3O35492 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clk3O35492 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.43■□□□□ 0.86
Clk3O35492 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clk3O35492 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms