Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Efnb3O35393 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Efnb3O35393 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Efnb3O35393 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.12■□□□□ 0.33
Efnb3O35393 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Efnb3O35393 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Efnb3O35393 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Efnb3O35393 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.11■□□□□ 0.33
Efnb3O35393 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Efnb3O35393 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 Gm22567-201ENSMUST00000175542 342 ntBASIC17.1■□□□□ 0.33
Efnb3O35393 Gm7432-201ENSMUST00000210343 879 ntBASIC17.1■□□□□ 0.33
Efnb3O35393 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Efnb3O35393 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Efnb3O35393 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.09■□□□□ 0.33
Efnb3O35393 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.09■□□□□ 0.33
Efnb3O35393 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Efnb3O35393 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.09■□□□□ 0.33
Efnb3O35393 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.09■□□□□ 0.33
Efnb3O35393 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Efnb3O35393 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Efnb3O35393 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Efnb3O35393 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Efnb3O35393 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Efnb3O35393 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Efnb3O35393 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Efnb3O35393 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.08■□□□□ 0.32
Efnb3O35393 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Efnb3O35393 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Efnb3O35393 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Efnb3O35393 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.07■□□□□ 0.32
Efnb3O35393 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.07■□□□□ 0.32
Efnb3O35393 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Efnb3O35393 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Efnb3O35393 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Efnb3O35393 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Efnb3O35393 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.06■□□□□ 0.32
Efnb3O35393 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Efnb3O35393 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Efnb3O35393 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.05■□□□□ 0.32
Efnb3O35393 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Efnb3O35393 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Efnb3O35393 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Efnb3O35393 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Efnb3O35393 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Efnb3O35393 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Efnb3O35393 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Efnb3O35393 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Efnb3O35393 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Efnb3O35393 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Efnb3O35393 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.04■□□□□ 0.32
Efnb3O35393 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.04■□□□□ 0.32
Efnb3O35393 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
Efnb3O35393 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.04■□□□□ 0.32
Efnb3O35393 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.04■□□□□ 0.32
Efnb3O35393 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.04■□□□□ 0.32
Efnb3O35393 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.04■□□□□ 0.32
Efnb3O35393 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Efnb3O35393 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Efnb3O35393 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Efnb3O35393 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Efnb3O35393 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Efnb3O35393 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Efnb3O35393 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Efnb3O35393 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.01■□□□□ 0.31
Efnb3O35393 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Efnb3O35393 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Efnb3O35393 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Efnb3O35393 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Efnb3O35393 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.01■□□□□ 0.31
Efnb3O35393 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Efnb3O35393 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Efnb3O35393 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Efnb3O35393 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms