Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2b3O09039 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2b3O09039 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2b3O09039 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh2b3O09039 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2b3O09039 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.27■□□□□ 0.68
Sh2b3O09039 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2b3O09039 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2b3O09039 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2b3O09039 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2b3O09039 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.26■□□□□ 0.67
Sh2b3O09039 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh2b3O09039 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh2b3O09039 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sh2b3O09039 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh2b3O09039 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2b3O09039 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh2b3O09039 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2b3O09039 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2b3O09039 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2b3O09039 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2b3O09039 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.25■□□□□ 0.67
Sh2b3O09039 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2b3O09039 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sh2b3O09039 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2b3O09039 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2b3O09039 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2b3O09039 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2b3O09039 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.23■□□□□ 0.67
Sh2b3O09039 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2b3O09039 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2b3O09039 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh2b3O09039 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2b3O09039 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Sh2b3O09039 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2b3O09039 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.22■□□□□ 0.67
Sh2b3O09039 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh2b3O09039 Gm43566-201ENSMUST00000196851 808 ntBASIC19.22■□□□□ 0.67
Sh2b3O09039 Gm15820-201ENSMUST00000201566 728 ntBASIC19.22■□□□□ 0.67
Sh2b3O09039 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2b3O09039 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2b3O09039 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2b3O09039 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2b3O09039 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sh2b3O09039 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2b3O09039 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sh2b3O09039 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.21■□□□□ 0.67
Sh2b3O09039 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2b3O09039 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2b3O09039 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sh2b3O09039 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2b3O09039 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sh2b3O09039 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sh2b3O09039 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2b3O09039 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2b3O09039 Gm45444-201ENSMUST00000211394 898 ntBASIC19.2■□□□□ 0.66
Sh2b3O09039 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh2b3O09039 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2b3O09039 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh2b3O09039 Gm13238-201ENSMUST00000117655 780 ntBASIC19.19■□□□□ 0.66
Sh2b3O09039 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sh2b3O09039 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2b3O09039 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Sh2b3O09039 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2b3O09039 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.19■□□□□ 0.66
Sh2b3O09039 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh2b3O09039 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2b3O09039 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh2b3O09039 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh2b3O09039 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2b3O09039 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sh2b3O09039 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh2b3O09039 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2b3O09039 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sh2b3O09039 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.17■□□□□ 0.66
Sh2b3O09039 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2b3O09039 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2b3O09039 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sh2b3O09039 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
Sh2b3O09039 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2b3O09039 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2b3O09039 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.16■□□□□ 0.66
Sh2b3O09039 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.16■□□□□ 0.66
Sh2b3O09039 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2b3O09039 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.16■□□□□ 0.66
Sh2b3O09039 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2b3O09039 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.15■□□□□ 0.66
Sh2b3O09039 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.15■□□□□ 0.66
Sh2b3O09039 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2b3O09039 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2b3O09039 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2b3O09039 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2b3O09039 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Sh2b3O09039 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2b3O09039 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2b3O09039 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
Sh2b3O09039 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
Sh2b3O09039 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2b3O09039 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh2b3O09039 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms