Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr2jO08740 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr2jO08740 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Polr2jO08740 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr2jO08740 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Polr2jO08740 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Polr2jO08740 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Polr2jO08740 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Polr2jO08740 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.86■□□□□ 0.93
Polr2jO08740 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Polr2jO08740 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Polr2jO08740 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Polr2jO08740 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Polr2jO08740 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Polr2jO08740 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Polr2jO08740 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Polr2jO08740 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Polr2jO08740 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.84■□□□□ 0.93
Polr2jO08740 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Polr2jO08740 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.84■□□□□ 0.93
Polr2jO08740 Gm7432-201ENSMUST00000210343 879 ntBASIC20.84■□□□□ 0.93
Polr2jO08740 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Polr2jO08740 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Polr2jO08740 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Polr2jO08740 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.83■□□□□ 0.93
Polr2jO08740 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Polr2jO08740 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Polr2jO08740 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Polr2jO08740 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Polr2jO08740 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Polr2jO08740 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Polr2jO08740 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr2jO08740 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr2jO08740 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Polr2jO08740 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Polr2jO08740 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Polr2jO08740 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.81■□□□□ 0.92
Polr2jO08740 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr2jO08740 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr2jO08740 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr2jO08740 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr2jO08740 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Polr2jO08740 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr2jO08740 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Polr2jO08740 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr2jO08740 Gm11599-201ENSMUST00000118720 878 ntBASIC20.79■□□□□ 0.92
Polr2jO08740 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr2jO08740 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Polr2jO08740 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr2jO08740 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Polr2jO08740 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Polr2jO08740 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Polr2jO08740 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Polr2jO08740 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr2jO08740 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr2jO08740 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr2jO08740 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr2jO08740 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr2jO08740 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Polr2jO08740 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr2jO08740 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr2jO08740 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Polr2jO08740 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Polr2jO08740 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Polr2jO08740 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Polr2jO08740 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.76■□□□□ 0.91
Polr2jO08740 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Polr2jO08740 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.75■□□□□ 0.91
Polr2jO08740 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr2jO08740 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr2jO08740 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Polr2jO08740 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Polr2jO08740 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Polr2jO08740 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr2jO08740 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Polr2jO08740 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.74■□□□□ 0.91
Polr2jO08740 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Polr2jO08740 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr2jO08740 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr2jO08740 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Polr2jO08740 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr2jO08740 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Polr2jO08740 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.72■□□□□ 0.91
Polr2jO08740 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.72■□□□□ 0.91
Polr2jO08740 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.72■□□□□ 0.91
Polr2jO08740 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.72■□□□□ 0.91
Polr2jO08740 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Polr2jO08740 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr2jO08740 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.71■□□□□ 0.91
Polr2jO08740 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms