Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3139J3QK78 Gm13238-201ENSMUST00000117655 780 ntBASIC21.81■■□□□ 1.08
Gm3139J3QK78 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.81■■□□□ 1.08
Gm3139J3QK78 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Gm3139J3QK78 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3139J3QK78 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3139J3QK78 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3139J3QK78 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3139J3QK78 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.8■■□□□ 1.08
Gm3139J3QK78 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Gm3139J3QK78 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3139J3QK78 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3139J3QK78 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Gm3139J3QK78 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3139J3QK78 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3139J3QK78 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Gm3139J3QK78 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Gm3139J3QK78 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3139J3QK78 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3139J3QK78 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3139J3QK78 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.78■■□□□ 1.08
Gm3139J3QK78 Gm22567-201ENSMUST00000175542 342 ntBASIC21.78■■□□□ 1.08
Gm3139J3QK78 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3139J3QK78 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3139J3QK78 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Gm5812-201ENSMUST00000061073 957 ntBASIC21.77■■□□□ 1.08
Gm3139J3QK78 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3139J3QK78 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Gm3139J3QK78 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm3139J3QK78 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm3139J3QK78 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Gm3139J3QK78 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Gm3139J3QK78 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm3139J3QK78 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3139J3QK78 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Gm3139J3QK78 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Gm3139J3QK78 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.73■■□□□ 1.07
Gm3139J3QK78 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.73■■□□□ 1.07
Gm3139J3QK78 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm3139J3QK78 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3139J3QK78 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Gm3139J3QK78 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3139J3QK78 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3139J3QK78 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3139J3QK78 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3139J3QK78 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3139J3QK78 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm3139J3QK78 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm3139J3QK78 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm3139J3QK78 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3139J3QK78 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3139J3QK78 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3139J3QK78 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.67■■□□□ 1.06
Gm3139J3QK78 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3139J3QK78 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3139J3QK78 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3139J3QK78 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3139J3QK78 Gm15546-201ENSMUST00000122095 826 ntBASIC21.66■■□□□ 1.06
Gm3139J3QK78 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Gm3139J3QK78 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Gm3139J3QK78 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3139J3QK78 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm3139J3QK78 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms