Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22,81■■□□□ 1,24
Col6a3E9PWQ3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22,81■■□□□ 1,24
Col6a3E9PWQ3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Col6a3E9PWQ3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Col6a3E9PWQ3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Col6a3E9PWQ3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22,8■■□□□ 1,24
Col6a3E9PWQ3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Col6a3E9PWQ3 Gm37179-201ENSMUST00000194862 823 ntBASIC22,79■■□□□ 1,24
Col6a3E9PWQ3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Col6a3E9PWQ3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Col6a3E9PWQ3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Col6a3E9PWQ3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Col6a3E9PWQ3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Col6a3E9PWQ3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Col6a3E9PWQ3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Col6a3E9PWQ3 AC117769.4-201ENSMUST00000225679 685 ntBASIC22,78■■□□□ 1,24
Col6a3E9PWQ3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22,77■■□□□ 1,24
Col6a3E9PWQ3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22,77■■□□□ 1,24
Col6a3E9PWQ3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Col6a3E9PWQ3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22,77■■□□□ 1,24
Col6a3E9PWQ3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22,76■■□□□ 1,23
Col6a3E9PWQ3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22,76■■□□□ 1,23
Col6a3E9PWQ3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22,76■■□□□ 1,23
Col6a3E9PWQ3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22,75■■□□□ 1,23
Col6a3E9PWQ3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22,75■■□□□ 1,23
Col6a3E9PWQ3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22,75■■□□□ 1,23
Col6a3E9PWQ3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Col6a3E9PWQ3 Gm14121-201ENSMUST00000121441 1380 ntBASIC22,74■■□□□ 1,23
Col6a3E9PWQ3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22,74■■□□□ 1,23
Col6a3E9PWQ3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22,73■■□□□ 1,23
Col6a3E9PWQ3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22,73■■□□□ 1,23
Col6a3E9PWQ3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22,72■■□□□ 1,23
Col6a3E9PWQ3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22,72■■□□□ 1,23
Col6a3E9PWQ3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Col6a3E9PWQ3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22,72■■□□□ 1,23
Col6a3E9PWQ3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22,71■■□□□ 1,23
Col6a3E9PWQ3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22,71■■□□□ 1,23
Col6a3E9PWQ3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22,71■■□□□ 1,23
Col6a3E9PWQ3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22,71■■□□□ 1,23
Col6a3E9PWQ3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,23
Col6a3E9PWQ3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22,7■■□□□ 1,22
Col6a3E9PWQ3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Col6a3E9PWQ3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22,7■■□□□ 1,22
Col6a3E9PWQ3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Col6a3E9PWQ3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22,69■■□□□ 1,22
Col6a3E9PWQ3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22,68■■□□□ 1,22
Col6a3E9PWQ3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22,68■■□□□ 1,22
Col6a3E9PWQ3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22,68■■□□□ 1,22
Col6a3E9PWQ3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Col6a3E9PWQ3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22,68■■□□□ 1,22
Col6a3E9PWQ3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22,67■■□□□ 1,22
Col6a3E9PWQ3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22,67■■□□□ 1,22
Col6a3E9PWQ3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22,67■■□□□ 1,22
Col6a3E9PWQ3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22,66■■□□□ 1,22
Col6a3E9PWQ3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Col6a3E9PWQ3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22,66■■□□□ 1,22
Col6a3E9PWQ3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22,66■■□□□ 1,22
Col6a3E9PWQ3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Col6a3E9PWQ3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22,65■■□□□ 1,22
Col6a3E9PWQ3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Col6a3E9PWQ3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Col6a3E9PWQ3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22,65■■□□□ 1,22
Col6a3E9PWQ3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22,64■■□□□ 1,22
Col6a3E9PWQ3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22,64■■□□□ 1,22
Col6a3E9PWQ3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22,64■■□□□ 1,21
Col6a3E9PWQ3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,21
Col6a3E9PWQ3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22,64■■□□□ 1,21
Col6a3E9PWQ3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22,64■■□□□ 1,21
Col6a3E9PWQ3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22,64■■□□□ 1,21
Col6a3E9PWQ3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Col6a3E9PWQ3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22,62■■□□□ 1,21
Col6a3E9PWQ3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
Col6a3E9PWQ3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22,61■■□□□ 1,21
Col6a3E9PWQ3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
Col6a3E9PWQ3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
Col6a3E9PWQ3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22,61■■□□□ 1,21
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms