Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Hfm1D3Z4R1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Hfm1D3Z4R1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Hfm1D3Z4R1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Hfm1D3Z4R1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.54■■■□□ 2.64
Hfm1D3Z4R1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Hfm1D3Z4R1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.54■■■□□ 2.64
Hfm1D3Z4R1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Hfm1D3Z4R1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hfm1D3Z4R1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hfm1D3Z4R1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
Hfm1D3Z4R1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hfm1D3Z4R1 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.49■■■□□ 2.63
Hfm1D3Z4R1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC31.49■■■□□ 2.63
Hfm1D3Z4R1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.49■■■□□ 2.63
Hfm1D3Z4R1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hfm1D3Z4R1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hfm1D3Z4R1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Hfm1D3Z4R1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Hfm1D3Z4R1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Hfm1D3Z4R1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Hfm1D3Z4R1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Hfm1D3Z4R1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Hfm1D3Z4R1 Gm27454-201ENSMUST00000185090 204 ntBASIC31.43■■■□□ 2.62
Hfm1D3Z4R1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Hfm1D3Z4R1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC31.43■■■□□ 2.62
Hfm1D3Z4R1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Hfm1D3Z4R1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Hfm1D3Z4R1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Hfm1D3Z4R1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Hfm1D3Z4R1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Hfm1D3Z4R1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Hfm1D3Z4R1 Gm10399-202ENSMUST00000202768 748 ntBASIC31.41■■■□□ 2.62
Hfm1D3Z4R1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Hfm1D3Z4R1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.41■■■□□ 2.62
Hfm1D3Z4R1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Hfm1D3Z4R1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Hfm1D3Z4R1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 Gm12821-201ENSMUST00000120022 600 ntBASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Hfm1D3Z4R1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC31.39■■■□□ 2.61
Hfm1D3Z4R1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.38■■■□□ 2.61
Hfm1D3Z4R1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Hfm1D3Z4R1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hfm1D3Z4R1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hfm1D3Z4R1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hfm1D3Z4R1 Gm11847-201ENSMUST00000125165 1119 ntBASIC31.37■■■□□ 2.61
Hfm1D3Z4R1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hfm1D3Z4R1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC31.37■■■□□ 2.61
Hfm1D3Z4R1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hfm1D3Z4R1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Hfm1D3Z4R1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.36■■■□□ 2.61
Hfm1D3Z4R1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Hfm1D3Z4R1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hfm1D3Z4R1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hfm1D3Z4R1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hfm1D3Z4R1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Hfm1D3Z4R1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Hfm1D3Z4R1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
Hfm1D3Z4R1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
Hfm1D3Z4R1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Hfm1D3Z4R1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Hfm1D3Z4R1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.32■■■□□ 2.61
Hfm1D3Z4R1 Gm45417-201ENSMUST00000209533 758 ntBASIC31.32■■■□□ 2.61
Hfm1D3Z4R1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Hfm1D3Z4R1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Hfm1D3Z4R1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Hfm1D3Z4R1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC31.31■■■□□ 2.6
Hfm1D3Z4R1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hfm1D3Z4R1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
Hfm1D3Z4R1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hfm1D3Z4R1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC31.3■■■□□ 2.6
Hfm1D3Z4R1 Golgb1-201ENSMUST00000023534 498 ntBASIC31.3■■■□□ 2.6
Hfm1D3Z4R1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 270.5 ms