Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Shank1D3YZU1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shank1D3YZU1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Shank1D3YZU1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.58■□□□□ 0.72
Shank1D3YZU1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.58■□□□□ 0.72
Shank1D3YZU1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank1D3YZU1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.58■□□□□ 0.72
Shank1D3YZU1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Shank1D3YZU1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shank1D3YZU1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shank1D3YZU1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Gm45417-201ENSMUST00000209533 758 ntBASIC19.57■□□□□ 0.72
Shank1D3YZU1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Shank1D3YZU1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank1D3YZU1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank1D3YZU1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank1D3YZU1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Shank1D3YZU1 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.56■□□□□ 0.72
Shank1D3YZU1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank1D3YZU1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank1D3YZU1 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.55■□□□□ 0.72
Shank1D3YZU1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank1D3YZU1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.55■□□□□ 0.72
Shank1D3YZU1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank1D3YZU1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shank1D3YZU1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.54■□□□□ 0.72
Shank1D3YZU1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank1D3YZU1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shank1D3YZU1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank1D3YZU1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank1D3YZU1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank1D3YZU1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shank1D3YZU1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 Gm40881-201ENSMUST00000223397 166 ntBASIC19.51■□□□□ 0.71
Shank1D3YZU1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank1D3YZU1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank1D3YZU1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shank1D3YZU1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
Shank1D3YZU1 Gm12821-201ENSMUST00000120022 600 ntBASIC19.5■□□□□ 0.71
Shank1D3YZU1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.5■□□□□ 0.71
Shank1D3YZU1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shank1D3YZU1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank1D3YZU1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank1D3YZU1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank1D3YZU1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.48■□□□□ 0.71
Shank1D3YZU1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shank1D3YZU1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank1D3YZU1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shank1D3YZU1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank1D3YZU1 Gm10399-202ENSMUST00000202768 748 ntBASIC19.47■□□□□ 0.71
Shank1D3YZU1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank1D3YZU1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank1D3YZU1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shank1D3YZU1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Shank1D3YZU1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank1D3YZU1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.46■□□□□ 0.71
Shank1D3YZU1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shank1D3YZU1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.46■□□□□ 0.71
Shank1D3YZU1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Shank1D3YZU1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank1D3YZU1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
Shank1D3YZU1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank1D3YZU1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shank1D3YZU1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.44■□□□□ 0.7
Shank1D3YZU1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.44■□□□□ 0.7
Shank1D3YZU1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank1D3YZU1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shank1D3YZU1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms